Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Rfx6Q8C7R7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx6Q8C7R7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx6Q8C7R7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx6Q8C7R7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx6Q8C7R7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx6Q8C7R7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx6Q8C7R7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms