Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Gm9727-201ENSMUST00000161387 555 ntBASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap54Q8C6S9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap54Q8C6S9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.14■□□□□ 0.18
Cfap54Q8C6S9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cfap54Q8C6S9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap54Q8C6S9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.13■□□□□ 0.17
Cfap54Q8C6S9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Chchd1-203ENSMUST00000224633 557 ntBASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
Cfap54Q8C6S9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms