Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp20Q8C6M1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Gm45328-201ENSMUST00000210942 917 ntBASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.61■□□□□ 0.57
Usp20Q8C6M1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp20Q8C6M1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp20Q8C6M1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Phf7-203ENSMUST00000226565 1971 ntBASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp20Q8C6M1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp20Q8C6M1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp20Q8C6M1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Usp20Q8C6M1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp20Q8C6M1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Gm11336-201ENSMUST00000118168 334 ntBASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Gm27357-201ENSMUST00000183754 135 ntBASIC18.58■□□□□ 0.56
Usp20Q8C6M1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp20Q8C6M1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Gm7153-201ENSMUST00000117092 455 ntBASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp20Q8C6M1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp20Q8C6M1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms