Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.8■□□□□ 0.28
Ccdc187Q8C5V8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Gm10052-201ENSMUST00000168019 960 ntBASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Gm7729-201ENSMUST00000050143 801 ntBASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc187Q8C5V8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc187Q8C5V8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Gm13884-201ENSMUST00000118103 829 ntBASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc187Q8C5V8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.77■□□□□ 0.27
Ccdc187Q8C5V8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc187Q8C5V8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms