Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trub1Q8C0D0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trub1Q8C0D0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trub1Q8C0D0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Gm11539-201ENSMUST00000119837 557 ntBASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Gm13436-201ENSMUST00000120418 567 ntBASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trub1Q8C0D0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trub1Q8C0D0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms