Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Gm27702-201ENSMUST00000184512 56 ntBASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx17Q8BVL3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gm15165-201ENSMUST00000118140 502 ntBASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gm44450-201ENSMUST00000199528 114 ntBASIC18.68■□□□□ 0.58
Snx17Q8BVL3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx17Q8BVL3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.67■□□□□ 0.58
Snx17Q8BVL3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Gm27867-201ENSMUST00000184778 125 ntBASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx17Q8BVL3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.65■□□□□ 0.58
Snx17Q8BVL3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Snx17Q8BVL3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx17Q8BVL3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm15467-201ENSMUST00000120582 445 ntBASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm6736-201ENSMUST00000166583 948 ntBASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm43575-201ENSMUST00000196420 516 ntBASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx17Q8BVL3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms