Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm13186-201ENSMUST00000118031 316 ntBASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm6623-201ENSMUST00000173570 544 ntBASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm27704-201ENSMUST00000185094 107 ntBASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Mir770-201ENSMUST00000103252 94 ntBASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.99■□□□□ 0.15
Cdk5rap1Q8BTW8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdk5rap1Q8BTW8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm18115-201ENSMUST00000221209 621 ntBASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms