Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ppp1r3eQ8BRJ4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm4974-201ENSMUST00000209974 875 ntBASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm20049-201ENSMUST00000219950 730 ntBASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ppp1r3eQ8BRJ4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ppp1r3eQ8BRJ4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm11249-201ENSMUST00000117071 859 ntBASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ppp1r3eQ8BRJ4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ppp1r3eQ8BRJ4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm24841-201ENSMUST00000158676 357 ntBASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Gm18025-201ENSMUST00000221733 862 ntBASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ppp1r3eQ8BRJ4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ppp1r3eQ8BRJ4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms