Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sfr1Q8BP27 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Gm45058-201ENSMUST00000205810 766 ntBASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sfr1Q8BP27 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Gm18958-201ENSMUST00000174258 762 ntBASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Mir5130-201ENSMUST00000175160 84 ntBASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sfr1Q8BP27 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sfr1Q8BP27 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm13836-201ENSMUST00000121159 501 ntBASIC17.11■□□□□ 0.33
Sfr1Q8BP27 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sfr1Q8BP27 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms