Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ckap4Q8BMK4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ckap4Q8BMK4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Gm13401-201ENSMUST00000117074 291 ntBASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ckap4Q8BMK4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ckap4Q8BMK4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ckap4Q8BMK4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ckap4Q8BMK4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Gm15378-201ENSMUST00000121894 207 ntBASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Gm18025-201ENSMUST00000221733 862 ntBASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms