Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Gm20760-201ENSMUST00000179197 648 ntBASIC16.3■□□□□ 0.2
Rnf38Q8BI21 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.3■□□□□ 0.2
Rnf38Q8BI21 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf38Q8BI21 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Gm24841-201ENSMUST00000158676 357 ntBASIC16.29■□□□□ 0.2
Rnf38Q8BI21 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf38Q8BI21 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf38Q8BI21 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Gm43183-201ENSMUST00000200632 547 ntBASIC16.27■□□□□ 0.2
Rnf38Q8BI21 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf38Q8BI21 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rnf38Q8BI21 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf38Q8BI21 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf38Q8BI21 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms