Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Clrn3Q8BHH8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Mir5122-201ENSMUST00000175004 89 ntBASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn3Q8BHH8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Gm12085-201ENSMUST00000119263 940 ntBASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Gm9731-201ENSMUST00000209480 747 ntBASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn3Q8BHH8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Clrn3Q8BHH8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Gm3375-201ENSMUST00000203929 796 ntBASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clrn3Q8BHH8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clrn3Q8BHH8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms