Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1bQ8BH88 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1bQ8BH88 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1bQ8BH88 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Gm7889-201ENSMUST00000185591 958 ntBASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Depdc1bQ8BH88 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1bQ8BH88 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Gm12085-201ENSMUST00000119263 940 ntBASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1bQ8BH88 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms