Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc5a7Q8BGY9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc5a7Q8BGY9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc5a7Q8BGY9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Gm2399-201ENSMUST00000104944 225 ntBASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc5a7Q8BGY9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms