Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.43■□□□□ 0.06
Lrrc39Q8BGI7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lrrc39Q8BGI7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lrrc39Q8BGI7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lrrc39Q8BGI7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lrrc39Q8BGI7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Gm43183-201ENSMUST00000200632 547 ntBASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lrrc39Q8BGI7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Gm12441-201ENSMUST00000121806 588 ntBASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lrrc39Q8BGI7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms