Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Samm50Q8BGH2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Samm50Q8BGH2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Timm23-208ENSMUST00000226683 750 ntBASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Samm50Q8BGH2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Samm50Q8BGH2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Samm50Q8BGH2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samm50Q8BGH2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Samm50Q8BGH2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Samm50Q8BGH2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Gm15565-201ENSMUST00000118890 427 ntBASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samm50Q8BGH2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Gm4974-201ENSMUST00000209974 875 ntBASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms