Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim6Q8BGE7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Gm8495-201ENSMUST00000188740 694 ntBASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim6Q8BGE7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.92■□□□□ 0.46
Trim6Q8BGE7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim6Q8BGE7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim6Q8BGE7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.91■□□□□ 0.46
Trim6Q8BGE7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms