Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Shank2Q80Z38 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Chchd1-203ENSMUST00000224633 557 ntBASIC21.75■■□□□ 1.07
Shank2Q80Z38 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.75■■□□□ 1.07
Shank2Q80Z38 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Shank2Q80Z38 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank2Q80Z38 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Shank2Q80Z38 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.74■■□□□ 1.07
Shank2Q80Z38 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank2Q80Z38 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.73■■□□□ 1.07
Shank2Q80Z38 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.73■■□□□ 1.07
Shank2Q80Z38 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.73■■□□□ 1.07
Shank2Q80Z38 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Shank2Q80Z38 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank2Q80Z38 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.72■■□□□ 1.07
Shank2Q80Z38 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.72■■□□□ 1.07
Shank2Q80Z38 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.72■■□□□ 1.07
Shank2Q80Z38 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shank2Q80Z38 Gm11780-201ENSMUST00000136880 516 ntBASIC21.71■■□□□ 1.07
Shank2Q80Z38 Gm5186-201ENSMUST00000218781 920 ntBASIC21.71■■□□□ 1.07
Shank2Q80Z38 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.71■■□□□ 1.07
Shank2Q80Z38 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank2Q80Z38 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Gm8097-201ENSMUST00000117903 829 ntBASIC21.7■■□□□ 1.06
Shank2Q80Z38 Gm12497-201ENSMUST00000138778 237 ntBASIC21.7■■□□□ 1.06
Shank2Q80Z38 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank2Q80Z38 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Shank2Q80Z38 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.69■■□□□ 1.06
Shank2Q80Z38 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank2Q80Z38 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms