Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nucks1Q80XU3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nucks1Q80XU3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nucks1Q80XU3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18■□□□□ 0.47
Nucks1Q80XU3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18■□□□□ 0.47
Nucks1Q80XU3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18■□□□□ 0.47
Nucks1Q80XU3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Nucks1Q80XU3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Gm13168-201ENSMUST00000121771 632 ntBASIC18■□□□□ 0.47
Nucks1Q80XU3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Nucks1Q80XU3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nucks1Q80XU3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Gm26596-201ENSMUST00000180464 2655 ntBASIC18■□□□□ 0.47
Nucks1Q80XU3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nucks1Q80XU3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nucks1Q80XU3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.99■□□□□ 0.47
Nucks1Q80XU3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nucks1Q80XU3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nucks1Q80XU3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nucks1Q80XU3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nucks1Q80XU3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nucks1Q80XU3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms