Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ttc28Q80XJ3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Gm4995-201ENSMUST00000117247 432 ntBASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ttc28Q80XJ3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ttc28Q80XJ3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms