Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vrk1Q80X41 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vrk1Q80X41 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vrk1Q80X41 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vrk1Q80X41 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Olfr129-201ENSMUST00000122318 993 ntBASIC16.08■□□□□ 0.16
Vrk1Q80X41 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Vrk1Q80X41 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vrk1Q80X41 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.08■□□□□ 0.16
Vrk1Q80X41 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.07■□□□□ 0.16
Vrk1Q80X41 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Gm18115-201ENSMUST00000221209 621 ntBASIC16.06■□□□□ 0.16
Vrk1Q80X41 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vrk1Q80X41 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Gm27000-201ENSMUST00000182943 842 ntBASIC16.05■□□□□ 0.16
Vrk1Q80X41 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.05■□□□□ 0.16
Vrk1Q80X41 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.05■□□□□ 0.16
Vrk1Q80X41 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vrk1Q80X41 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.04■□□□□ 0.16
Vrk1Q80X41 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Gm24589-201ENSMUST00000116692 94 ntBASIC16.04■□□□□ 0.16
Vrk1Q80X41 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.04■□□□□ 0.16
Vrk1Q80X41 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms