Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf38bQ80SY5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.58■□□□□ 0.41
Prpf38bQ80SY5 Dancr-204ENSMUST00000132389 2347 ntBASIC17.58■□□□□ 0.41
Prpf38bQ80SY5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Gm5864-201ENSMUST00000202263 970 ntBASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Prpf38bQ80SY5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Gm18195-201ENSMUST00000207604 706 ntBASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf38bQ80SY5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38bQ80SY5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Gm27459-201ENSMUST00000184860 107 ntBASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38bQ80SY5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Gm18206-201ENSMUST00000207027 926 ntBASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38bQ80SY5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms