Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ShprhQ7TPQ3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ShprhQ7TPQ3 Gm43808-201ENSMUST00000202534 2065 ntBASIC23.88■■□□□ 1.41
ShprhQ7TPQ3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ShprhQ7TPQ3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
ShprhQ7TPQ3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 Gm12497-201ENSMUST00000138778 237 ntBASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ShprhQ7TPQ3 Gm13418-201ENSMUST00000119097 944 ntBASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ShprhQ7TPQ3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Gm16499-203ENSMUST00000204633 2177 ntBASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Gm43332-201ENSMUST00000202511 1044 ntBASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 AC127349.1-201ENSMUST00000224590 266 ntBASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ShprhQ7TPQ3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Gm11594-201ENSMUST00000122313 162 ntBASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Gm42670-201ENSMUST00000201816 1292 ntBASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Fcho2-208ENSMUST00000224992 2964 ntBASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ShprhQ7TPQ3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Gm4459-201ENSMUST00000118750 468 ntBASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Psmb5-202ENSMUST00000227257 622 ntBASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Gm18856-201ENSMUST00000178096 1374 ntBASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
ShprhQ7TPQ3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Gm8097-201ENSMUST00000117903 829 ntBASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Gm15173-201ENSMUST00000122049 433 ntBASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ShprhQ7TPQ3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Gm8000-201ENSMUST00000188378 592 ntBASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC23.82■■□□□ 1.4
ShprhQ7TPQ3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 AC107711.5-202ENSMUST00000226429 702 ntBASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 AC114585.2-202ENSMUST00000228094 426 ntBASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC23.81■■□□□ 1.4
ShprhQ7TPQ3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Gm6550-201ENSMUST00000187574 993 ntBASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms