Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx55Q6ZPL9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx55Q6ZPL9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Mir5126-201ENSMUST00000175513 77 ntBASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Gm5364-201ENSMUST00000216789 889 ntBASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx55Q6ZPL9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx55Q6ZPL9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Gm11594-201ENSMUST00000122313 162 ntBASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ddx55Q6ZPL9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx55Q6ZPL9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms