Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Gm27357-201ENSMUST00000183754 135 ntBASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Gm27742-201ENSMUST00000184667 60 ntBASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1l1Q6T3U4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1l1Q6T3U4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1l1Q6T3U4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.15■□□□□ 0.82
Npc1l1Q6T3U4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Npc1l1Q6T3U4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Gm18115-201ENSMUST00000221209 621 ntBASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1l1Q6T3U4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Phf7-203ENSMUST00000226565 1971 ntBASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms