Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Gm27628-201ENSMUST00000184911 107 ntBASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn10aQ6QIY3 Gm11780-201ENSMUST00000136880 516 ntBASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn10aQ6QIY3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 Gm15590-201ENSMUST00000078419 552 ntBASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn10aQ6QIY3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn10aQ6QIY3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Gm14822-201ENSMUST00000122247 291 ntBASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn10aQ6QIY3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn10aQ6QIY3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Gm25406-201ENSMUST00000157599 105 ntBASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn10aQ6QIY3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn10aQ6QIY3 Gm24513-201ENSMUST00000174964 138 ntBASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms