Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Herc4Q6PAV2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Gm2274-201ENSMUST00000184539 609 ntBASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc4Q6PAV2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.6■□□□□ 0.57
Herc4Q6PAV2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Herc4Q6PAV2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Herc4Q6PAV2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Herc4Q6PAV2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms