Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Casc4Q6P2L7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Casc4Q6P2L7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.08■□□□□ 0.32
Casc4Q6P2L7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Casc4Q6P2L7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Casc4Q6P2L7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Casc4Q6P2L7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Casc4Q6P2L7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Casc4Q6P2L7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms