Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Odf3b-204ENSMUST00000227834 930 ntBASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp140Q6NSQ5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.08■□□□□ 0.33
Sp140Q6NSQ5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Gm21814-202ENSMUST00000203277 873 ntBASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp140Q6NSQ5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sp140Q6NSQ5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms