Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt40Q6IFX3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt40Q6IFX3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt40Q6IFX3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt40Q6IFX3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt40Q6IFX3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Gm27741-201ENSMUST00000185060 237 ntBASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Krt40Q6IFX3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt40Q6IFX3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms