Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.22■□□□□ 0.35
Cep290Q6A078 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cep290Q6A078 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.21■□□□□ 0.35
Cep290Q6A078 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cep290Q6A078 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cep290Q6A078 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.21■□□□□ 0.35
Cep290Q6A078 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cep290Q6A078 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.21■□□□□ 0.34
Cep290Q6A078 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Cep290Q6A078 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.21■□□□□ 0.34
Cep290Q6A078 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.21■□□□□ 0.34
Cep290Q6A078 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Cep290Q6A078 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.2■□□□□ 0.34
Cep290Q6A078 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.2■□□□□ 0.34
Cep290Q6A078 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.2■□□□□ 0.34
Cep290Q6A078 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cep290Q6A078 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cep290Q6A078 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Gm20949-201ENSMUST00000206478 952 ntBASIC17.2■□□□□ 0.34
Cep290Q6A078 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cep290Q6A078 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.19■□□□□ 0.34
Cep290Q6A078 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cep290Q6A078 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cep290Q6A078 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.19■□□□□ 0.34
Cep290Q6A078 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Cep290Q6A078 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.18■□□□□ 0.34
Cep290Q6A078 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.18■□□□□ 0.34
Cep290Q6A078 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms