Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.68■□□□□ 0.42
Scube3Q66PY1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.68■□□□□ 0.42
Scube3Q66PY1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube3Q66PY1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.67■□□□□ 0.42
Scube3Q66PY1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.67■□□□□ 0.42
Scube3Q66PY1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.67■□□□□ 0.42
Scube3Q66PY1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube3Q66PY1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.66■□□□□ 0.42
Scube3Q66PY1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Phf7-203ENSMUST00000226565 1971 ntBASIC17.66■□□□□ 0.42
Scube3Q66PY1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Scube3Q66PY1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Scube3Q66PY1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.65■□□□□ 0.42
Scube3Q66PY1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube3Q66PY1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms