Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Six1Q62231 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.29■□□□□ 0.36
Six1Q62231 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.29■□□□□ 0.36
Six1Q62231 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Six1Q62231 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Six1Q62231 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Six1Q62231 Gm10653-202ENSMUST00000139570 835 ntBASIC17.28■□□□□ 0.36
Six1Q62231 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.28■□□□□ 0.36
Six1Q62231 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six1Q62231 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Six1Q62231 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.27■□□□□ 0.36
Six1Q62231 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Six1Q62231 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Gm29257-201ENSMUST00000186115 639 ntBASIC17.27■□□□□ 0.36
Six1Q62231 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.27■□□□□ 0.36
Six1Q62231 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.27■□□□□ 0.36
Six1Q62231 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Six1Q62231 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Six1Q62231 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six1Q62231 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six1Q62231 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.27■□□□□ 0.35
Six1Q62231 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.26■□□□□ 0.35
Six1Q62231 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Six1Q62231 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six1Q62231 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.26■□□□□ 0.35
Six1Q62231 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.26■□□□□ 0.35
Six1Q62231 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.26■□□□□ 0.35
Six1Q62231 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.26■□□□□ 0.35
Six1Q62231 Gm7791-201ENSMUST00000219066 539 ntBASIC17.26■□□□□ 0.35
Six1Q62231 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Six1Q62231 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six1Q62231 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six1Q62231 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.26■□□□□ 0.35
Six1Q62231 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six1Q62231 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six1Q62231 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.25■□□□□ 0.35
Six1Q62231 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.25■□□□□ 0.35
Six1Q62231 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms