Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VcanQ62059 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Gm11025-201ENSMUST00000140773 466 ntBASIC15.81■□□□□ 0.12
VcanQ62059 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.81■□□□□ 0.12
VcanQ62059 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.81■□□□□ 0.12
VcanQ62059 Gm13036-201ENSMUST00000117799 748 ntBASIC15.81■□□□□ 0.12
VcanQ62059 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.81■□□□□ 0.12
VcanQ62059 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.81■□□□□ 0.12
VcanQ62059 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.81■□□□□ 0.12
VcanQ62059 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.81■□□□□ 0.12
VcanQ62059 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VcanQ62059 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VcanQ62059 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.8■□□□□ 0.12
VcanQ62059 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VcanQ62059 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.8■□□□□ 0.12
VcanQ62059 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VcanQ62059 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VcanQ62059 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VcanQ62059 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VcanQ62059 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
VcanQ62059 Gm11336-201ENSMUST00000118168 334 ntBASIC15.79■□□□□ 0.12
VcanQ62059 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.79■□□□□ 0.12
VcanQ62059 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.79■□□□□ 0.12
VcanQ62059 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.79■□□□□ 0.12
VcanQ62059 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VcanQ62059 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VcanQ62059 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.78■□□□□ 0.12
VcanQ62059 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.78■□□□□ 0.12
VcanQ62059 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.78■□□□□ 0.12
VcanQ62059 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.78■□□□□ 0.12
VcanQ62059 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.78■□□□□ 0.12
VcanQ62059 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Gm14127-201ENSMUST00000117906 678 ntBASIC15.78■□□□□ 0.12
VcanQ62059 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VcanQ62059 Gm13312-201ENSMUST00000119631 718 ntBASIC15.78■□□□□ 0.12
VcanQ62059 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VcanQ62059 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VcanQ62059 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.77■□□□□ 0.12
VcanQ62059 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VcanQ62059 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms