Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Irf9Q61179 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.99■□□□□ 0.95
Irf9Q61179 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Gm18669-201ENSMUST00000216049 778 ntBASIC20.99■□□□□ 0.95
Irf9Q61179 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.99■□□□□ 0.95
Irf9Q61179 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Irf9Q61179 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.98■□□□□ 0.95
Irf9Q61179 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Irf9Q61179 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf9Q61179 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Irf9Q61179 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Irf9Q61179 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.97■□□□□ 0.95
Irf9Q61179 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Irf9Q61179 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf9Q61179 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf9Q61179 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Irf9Q61179 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf9Q61179 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.96■□□□□ 0.95
Irf9Q61179 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Irf9Q61179 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf9Q61179 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Irf9Q61179 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Irf9Q61179 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.95■□□□□ 0.94
Irf9Q61179 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Irf9Q61179 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.95■□□□□ 0.94
Irf9Q61179 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.95■□□□□ 0.94
Irf9Q61179 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Irf9Q61179 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.95■□□□□ 0.94
Irf9Q61179 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf9Q61179 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Irf9Q61179 Gm17971-201ENSMUST00000190239 806 ntBASIC20.94■□□□□ 0.94
Irf9Q61179 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Irf9Q61179 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Irf9Q61179 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Irf9Q61179 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Irf9Q61179 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Irf9Q61179 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Irf9Q61179 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Irf9Q61179 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.92■□□□□ 0.94
Irf9Q61179 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf9Q61179 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Irf9Q61179 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.92■□□□□ 0.94
Irf9Q61179 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.92■□□□□ 0.94
Irf9Q61179 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms