Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Gm10576-201ENSMUST00000191927 825 ntBASIC20.47■□□□□ 0.87
Ubr3Q5U430 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.47■□□□□ 0.87
Ubr3Q5U430 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ubr3Q5U430 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr3Q5U430 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ubr3Q5U430 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr3Q5U430 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.45■□□□□ 0.86
Ubr3Q5U430 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr3Q5U430 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.44■□□□□ 0.86
Ubr3Q5U430 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.44■□□□□ 0.86
Ubr3Q5U430 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.44■□□□□ 0.86
Ubr3Q5U430 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr3Q5U430 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.43■□□□□ 0.86
Ubr3Q5U430 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ubr3Q5U430 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.43■□□□□ 0.86
Ubr3Q5U430 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.43■□□□□ 0.86
Ubr3Q5U430 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.43■□□□□ 0.86
Ubr3Q5U430 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ubr3Q5U430 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.42■□□□□ 0.86
Ubr3Q5U430 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.42■□□□□ 0.86
Ubr3Q5U430 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr3Q5U430 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Gm25406-201ENSMUST00000157599 105 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.41■□□□□ 0.86
Ubr3Q5U430 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 Chchd1-203ENSMUST00000224633 557 ntBASIC20.41■□□□□ 0.86
Ubr3Q5U430 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr3Q5U430 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms