Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim38Q5SZ99 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Gm27463-201ENSMUST00000183569 57 ntBASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim38Q5SZ99 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim38Q5SZ99 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim38Q5SZ99 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim38Q5SZ99 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms