Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 AA386476-201ENSMUST00000098781 1665 ntBASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-1Q5R1I8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-1Q5R1I8 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-1Q5R1I8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms