Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 AW822252-206ENSMUST00000208904 237 ntBASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf43Q5NCP0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf43Q5NCP0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf43Q5NCP0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms