Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trpm3Q5F4S9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Gm13312-201ENSMUST00000119631 718 ntBASIC21.32■■□□□ 1
Trpm3Q5F4S9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm3Q5F4S9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.31■■□□□ 1
Trpm3Q5F4S9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm3Q5F4S9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.31■■□□□ 1
Trpm3Q5F4S9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Gm36967-201ENSMUST00000193814 266 ntBASIC21.31■■□□□ 1
Trpm3Q5F4S9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trpm3Q5F4S9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm3Q5F4S9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm3Q5F4S9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44357-201ENSMUST00000195897 142 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm19658-201ENSMUST00000196231 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44367-201ENSMUST00000196836 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44350-201ENSMUST00000197197 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44390-201ENSMUST00000197533 144 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44313-201ENSMUST00000198018 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44486-201ENSMUST00000198508 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44454-201ENSMUST00000198541 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44314-201ENSMUST00000199263 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44394-201ENSMUST00000199558 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44484-201ENSMUST00000199873 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44466-201ENSMUST00000200264 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Gm44359-201ENSMUST00000200671 138 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm3Q5F4S9 Rarb-207ENSMUST00000225921 2756 ntBASIC21.28■■□□□ 1
Trpm3Q5F4S9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.27■■□□□ 1
Trpm3Q5F4S9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.27■■□□□ 1
Trpm3Q5F4S9 Gm27525-201ENSMUST00000184465 107 ntBASIC21.27■■□□□ 1
Trpm3Q5F4S9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm3Q5F4S9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trpm3Q5F4S9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms