Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rc3h1Q4VGL6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rc3h1Q4VGL6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Gm18421-201ENSMUST00000204122 625 ntBASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rc3h1Q4VGL6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rc3h1Q4VGL6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rc3h1Q4VGL6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Mir3081-201ENSMUST00000175305 84 ntBASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Gm27357-201ENSMUST00000183754 135 ntBASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rc3h1Q4VGL6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms