Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Pds5bQ4VA53 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pds5bQ4VA53 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pds5bQ4VA53 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Gm5745-201ENSMUST00000183748 313 ntBASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pds5bQ4VA53 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Pds5bQ4VA53 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Gm27494-201ENSMUST00000184735 189 ntBASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pds5bQ4VA53 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Mir1895-201ENSMUST00000122615 79 ntBASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Gm25406-201ENSMUST00000157599 105 ntBASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 AC131709.1-201ENSMUST00000224731 1180 ntBASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pds5bQ4VA53 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC29.29■■■□□ 2.28
Pds5bQ4VA53 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Arhgef33-209ENSMUST00000225223 714 ntBASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Gm17271-201ENSMUST00000165535 355 ntBASIC29.28■■■□□ 2.28
Pds5bQ4VA53 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pds5bQ4VA53 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Gm27646-201ENSMUST00000183989 110 ntBASIC29.26■■■□□ 2.27
Pds5bQ4VA53 AC154572.2-201ENSMUST00000225105 997 ntBASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
Pds5bQ4VA53 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Gm5312-201ENSMUST00000203728 547 ntBASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC29.25■■■□□ 2.27
Pds5bQ4VA53 Gm10616-201ENSMUST00000205285 2127 ntBASIC29.24■■■□□ 2.27
Pds5bQ4VA53 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms