Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smcr8Q3UMB5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smcr8Q3UMB5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Gm11950-201ENSMUST00000121615 838 ntBASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Gm37722-201ENSMUST00000193757 208 ntBASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smcr8Q3UMB5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Gm6623-201ENSMUST00000173570 544 ntBASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smcr8Q3UMB5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smcr8Q3UMB5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Smcr8Q3UMB5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Mir770-201ENSMUST00000103252 94 ntBASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms