Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Gm43514-201ENSMUST00000198852 424 ntBASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc6aQ3UHK8 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm12644-201ENSMUST00000119935 606 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44357-201ENSMUST00000195897 142 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm19658-201ENSMUST00000196231 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44367-201ENSMUST00000196836 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44350-201ENSMUST00000197197 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44390-201ENSMUST00000197533 144 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44313-201ENSMUST00000198018 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44486-201ENSMUST00000198508 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44454-201ENSMUST00000198541 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44314-201ENSMUST00000199263 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44394-201ENSMUST00000199558 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44484-201ENSMUST00000199873 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44466-201ENSMUST00000200264 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm44359-201ENSMUST00000200671 138 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Gm6443-201ENSMUST00000203599 874 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Rps4l-201ENSMUST00000071745 943 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tnrc6aQ3UHK8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Gm5864-201ENSMUST00000202263 970 ntBASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnrc6aQ3UHK8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms