Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil3Q3UFQ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Gm43514-201ENSMUST00000198852 424 ntBASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil3Q3UFQ8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Gm29707-201ENSMUST00000196325 491 ntBASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil3Q3UFQ8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil3Q3UFQ8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Gm18421-201ENSMUST00000204122 625 ntBASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil3Q3UFQ8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Gm6443-201ENSMUST00000203599 874 ntBASIC20.2■□□□□ 0.82
Carmil3Q3UFQ8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms