Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tmem88bQ3TYP4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 AW822252-206ENSMUST00000208904 237 ntBASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tmem88bQ3TYP4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem88bQ3TYP4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Tmem88bQ3TYP4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tmem88bQ3TYP4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem88bQ3TYP4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.99□□□□□ -0.17
Tmem88bQ3TYP4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem88bQ3TYP4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms