Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdnep1Q3TP92 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdnep1Q3TP92 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ctdnep1Q3TP92 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdnep1Q3TP92 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdnep1Q3TP92 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctdnep1Q3TP92 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gm13559-201ENSMUST00000120476 863 ntBASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdnep1Q3TP92 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gm10252-201ENSMUST00000209541 832 ntBASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdnep1Q3TP92 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdnep1Q3TP92 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms