Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Khdc4Q3TCX3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Khdc4Q3TCX3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Khdc4Q3TCX3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Khdc4Q3TCX3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Khdc4Q3TCX3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms