Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nhej1Q3KNJ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Gm43183-201ENSMUST00000200632 547 ntBASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhej1Q3KNJ2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nhej1Q3KNJ2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nhej1Q3KNJ2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms