Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim72Q1XH17 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim72Q1XH17 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.97■□□□□ 0.47
Trim72Q1XH17 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.97■□□□□ 0.47
Trim72Q1XH17 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim72Q1XH17 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Gm7370-201ENSMUST00000219471 767 ntBASIC17.96■□□□□ 0.47
Trim72Q1XH17 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim72Q1XH17 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim72Q1XH17 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Trim72Q1XH17 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim72Q1XH17 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Gm13216-201ENSMUST00000117145 591 ntBASIC17.95■□□□□ 0.46
Trim72Q1XH17 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim72Q1XH17 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.94■□□□□ 0.46
Trim72Q1XH17 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Mir6982-201ENSMUST00000184354 68 ntBASIC17.94■□□□□ 0.46
Trim72Q1XH17 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.94■□□□□ 0.46
Trim72Q1XH17 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.94■□□□□ 0.46
Trim72Q1XH17 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim72Q1XH17 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim72Q1XH17 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim72Q1XH17 Gm43799-201ENSMUST00000201845 579 ntBASIC17.93■□□□□ 0.46
Trim72Q1XH17 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms